All modules for which code is available
- smlmlp.modules.Config_LP.Config
- smlmlp.modules.Locs_LP.Locs
- smlmlp.modules.Locs_LP._functions.append_df
- smlmlp.modules.Locs_LP._functions.open_df
- smlmlp.modules.Locs_LP._functions.save_df
- smlmlp.modules.analysis_LP._functions.aggregate.aggregate_flux
- smlmlp.modules.analysis_LP._functions.aggregate.aggregate_ratio
- smlmlp.modules.analysis_LP._functions.associate.associate_consecutive_frames
- smlmlp.modules.analysis_LP._functions.associate.associate_consecutive_frames_radius
- smlmlp.modules.analysis_LP._functions.associate.associate_density
- smlmlp.modules.analysis_LP._functions.associate.associate_different_channels
- smlmlp.modules.analysis_LP._functions.associate.associate_molecules
- smlmlp.modules.analysis_LP._functions.calibration.calibration_convert
- smlmlp.modules.analysis_LP._functions.calibration.calibration_flim
- smlmlp.modules.analysis_LP._functions.calibration.calibration_fuse
- smlmlp.modules.analysis_LP._functions.calibration.calibration_spheres
- smlmlp.modules.analysis_LP._functions.calibration.calibration_zstacks
- smlmlp.modules.analysis_LP._functions.clustering.clustering_dbscan
- smlmlp.modules.analysis_LP._functions.demix.demix_histogram
- smlmlp.modules.analysis_LP._functions.drift.drift_aim
- smlmlp.modules.analysis_LP._functions.drift.drift_comet
- smlmlp.modules.analysis_LP._functions.drift.drift_crosscorr
- smlmlp.modules.analysis_LP._functions.drift.drift_meanshift
- smlmlp.modules.analysis_LP._functions.image.image_colmap
- smlmlp.modules.analysis_LP._functions.image.image_picker
- smlmlp.modules.analysis_LP._functions.image.image_pixel
- smlmlp.modules.analysis_LP._functions.image.image_smlm
- smlmlp.modules.analysis_LP._functions.image.image_smlm3d
- smlmlp.modules.analysis_LP._functions.image.image_stackmap
- smlmlp.modules.analysis_LP._functions.image.image_vectors
- smlmlp.modules.analysis_LP._functions.lost.lost_channels
- smlmlp.modules.analysis_LP._functions.lost.lost_frames
- smlmlp.modules.analysis_LP._functions.metric.metric_frc
- smlmlp.modules.analysis_LP._functions.metric.metric_nena
- smlmlp.modules.analysis_LP._functions.metric.metric_overloc
- smlmlp.modules.analysis_LP._functions.metric.metric_photophysics
- smlmlp.modules.analysis_LP._functions.metric.metric_squirrel
- smlmlp.modules.analysis_LP._functions.modloc.modloc_axial
- smlmlp.modules.analysis_LP._functions.modloc.modloc_demodulated
- smlmlp.modules.analysis_LP._functions.modloc.modloc_sequential
- smlmlp.modules.analysis_LP._functions.modloc.modloc_transverse
- smlmlp.modules.analysis_LP._functions.orient.orient_polar2d
- smlmlp.modules.analysis_LP._functions.orient.orient_polar3d
- smlmlp.modules.analysis_LP._functions.transform.inv_transform_locs
- smlmlp.modules.analysis_LP._functions.transform.transform_locs
- smlmlp.modules.analysis_LP.analysis
- smlmlp.modules.block_LP._functions.background.bkgd_combination
- smlmlp.modules.block_LP._functions.background.bkgd_spatial_mean
- smlmlp.modules.block_LP._functions.background.bkgd_spatial_opening
- smlmlp.modules.block_LP._functions.background.bkgd_temporal_median
- smlmlp.modules.block_LP._functions.blink.blink_spatial_psf
- smlmlp.modules.block_LP._functions.blink.blink_temporal_on
- smlmlp.modules.block_LP._functions.crop.crop_individual_extract
- smlmlp.modules.block_LP._functions.crop.crop_remove_bkgd
- smlmlp.modules.block_LP._functions.detection.detect_gain
- smlmlp.modules.block_LP._functions.detection.detect_snr
- smlmlp.modules.block_LP._functions.detection.detect_spatial_maxima
- smlmlp.modules.block_LP._functions.globdetection.globdet_channels
- smlmlp.modules.block_LP._functions.globdetection.globdet_local_maxima
- smlmlp.modules.block_LP._functions.globdetection.globdet_snr
- smlmlp.modules.block_LP._functions.globlocalization.globloc_fit
- smlmlp.modules.block_LP._functions.integrate.integrate_crop
- smlmlp.modules.block_LP._functions.localization.locs_individual_barycenter
- smlmlp.modules.block_LP._functions.localization.locs_individual_fit
- smlmlp.modules.block_LP._functions.localization.locs_individual_gaussfit
- smlmlp.modules.block_LP._functions.localization.locs_individual_isogaussfit
- smlmlp.modules.block_LP._functions.localization.locs_individual_splinefit
- smlmlp.modules.block_LP._functions.registration.registrate_ecc_affine
- smlmlp.modules.block_LP._functions.registration.registrate_locs_affine
- smlmlp.modules.block_LP._functions.registration.registrate_optimize_images
- smlmlp.modules.block_LP._functions.registration.registrate_pcc_shift
- smlmlp.modules.block_LP._functions.registration.registrate_solve_redundant_affine
- smlmlp.modules.block_LP._functions.registration.registrate_solve_redundant_shift
- smlmlp.modules.block_LP._functions.registration.registrate_transform
- smlmlp.modules.block_LP._functions.signal.signal_combination
- smlmlp.modules.block_LP._functions.signal.signal_spatial_filter
- smlmlp.modules.block_LP._functions.signal.signal_temporal_filter
- smlmlp.modules.block_LP.block
- smlmlp.modules.simulation_LP.simulation